The Global Soil Mycobiome consortium dataset for boosting fungal diversity research
| Author | Tedersoo, Leho |
| Author | Mikryukov, Vladimir |
| Author | Anslan, Sten |
| Author | Bahram, Mohammad |
| Author | Khalid, Abdul Nasir |
| Author | Corrales, Adriana |
| Author | Agan, Ahto |
| Author | Vasco-Palacios, Aída M. |
| Author | Saitta, Alessandro |
| Author | Antonelli, Alexandre |
| Author | Rinaldi, Andrea C. |
| Author | Verbeken, Annemieke |
| Author | Sulistyo, Bobby P. |
| Author | Tamgnoue, Boris |
| Author | Furneaux, Brendan |
| Author | Ritter, Camila Duarte |
| Author | Nyamukondiwa, Casper |
| Author | Sharp, Cathy |
| Author | Marín, César |
| Author | Dai, D. Q. |
| Author | Gohar, Daniyal |
| Author | Sharmah, Dipon |
| Author | Biersma, Elisabeth Machteld |
| Author | Cameron, Erin K. |
| Author | De Crop, Eske |
| Author | Otsing, Eveli |
| Author | Davydov, Evgeny A. |
| Author | Albornoz, Felipe E. |
| Author | Brearley, Francis Q. |
| Author | Buegger, Franz |
| Author | Gates, Genevieve |
| Author | Zahn, Geoffrey |
| Author | Bonito, Gregory |
| Author | Hiiesalu, Indrek |
| Author | Hiiesalu, Inga |
| Author | Zettur, Irma |
| Author | Barrio, Isabel C. |
| Author | Pärn, Jaan |
| Author | Heilmann-Clausen, Jacob |
| Author | Ankuda, Jelena |
| Author | Kupagme, John Y. |
| Author | Sarapuu, Joosep |
| Author | Maciá-Vicente, Jose G. |
| Author | Fovo, Joseph Djeugap |
| Author | Geml, József |
| Author | Alatalo, Juha M. |
| Author | Alvarez-Manjarrez, Julieta |
| Author | Monkai, Jutamart |
| Author | Põldmaa, Kadri |
| Author | Runnel, Kadri |
| Author | Adamson, Kalev |
| Author | Bråthen, Kari A. |
| Author | Pritsch, Karin |
| Author | Tchan, Kassim I. |
| Author | Armolaitis, Kęstutis |
| Author | Hyde, Kevin D. |
| Author | Newsham, Kevin K. |
| Author | Panksep, Kristel |
| Author | Adebola, Lateef A. |
| Author | Lamit, Louis J. |
| Author | Saba, Malka |
| Author | da Silva Cáceres, Marcela E. |
| Author | Tuomi, Maria |
| Author | Gryzenhout, Marieka |
| Author | Bauters, Marijn |
| Author | Bálint, Miklós |
| Author | Wijayawardene, Nalin |
| Author | Hagh-Doust, Niloufar |
| Author | Yorou, Nourou S. |
| Author | Kurina, Olavi |
| Author | Mortimer, Peter E. |
| Author | Meidl, Peter |
| Author | Nilsson, R. Henrik |
| Author | Puusepp, Rasmus |
| Author | Casique-Valdés, Rebeca |
| Author | Drenkhan, Rein |
| Author | Garibay-Orijel, Roberto |
| Author | Godoy, Roberto |
| Author | Alfarraj, Saleh |
| Author | Rahimlou, Saleh |
| Author | Põlme, Sergei |
| Author | Dudov, Sergey V. |
| Author | Mundra, Sunil |
| Author | Ahmed, Talaat |
| Author | Netherway, Tarquin |
| Author | Henkel, Terry W. |
| Author | Roslin, Tomas |
| Author | Fedosov, Vladimir E. |
| Author | Onipchenko, Vladimir G. |
| Author | Yasanthika, W. A.Erandi |
| Author | Lim, Young Woon |
| Author | Piepenbring, Meike |
| Author | Klavina, Darta |
| Author | Kõljalg, Urmas |
| Author | Abarenkov, Kessy |
| Available date | 2022-04-20T08:00:03Z |
| Publication Date | 2021-11-01 |
| Publication Name | Fungal Diversity |
| Identifier | http://dx.doi.org/10.1007/s13225-021-00493-7 |
| Citation | Tedersoo, L., Mikryukov, V., Anslan, S. et al. The Global Soil Mycobiome consortium dataset for boosting fungal diversity research. Fungal Diversity 111, 573–588 (2021). https://doi.org/10.1007/s13225-021-00493-7 |
| ISSN | 15602745 |
| Abstract | Fungi are highly important biotic components of terrestrial ecosystems, but we still have a very limited understanding about their diversity and distribution. This data article releases a global soil fungal dataset of the Global Soil Mycobiome consortium (GSMc) to boost further research in fungal diversity, biogeography and macroecology. The dataset comprises 722,682 fungal operational taxonomic units (OTUs) derived from PacBio sequencing of full-length ITS and 18S-V9 variable regions from 3200 plots in 108 countries on all continents. The plots are supplied with geographical and edaphic metadata. The OTUs are taxonomically and functionally assigned to guilds and other functional groups. The entire dataset has been corrected by excluding chimeras, index-switch artefacts and potential contamination. The dataset is more inclusive in terms of geographical breadth and phylogenetic diversity of fungi than previously published data. The GSMc dataset is available over the PlutoF repository. |
| Sponsor | The bulk of this work was supported by the Estonian Science Foundation (Grant Nos. PRG632, PSG136, MOBTP198, PUT1170), Norway-Baltic EEA financial mechanism (Grant No. EMP442), RSF19-14-00038, DSFP-2021 and Novo Nordisk Fonden (Silva Nova). |
| Language | en |
| Publisher | Springer |
| Subject | Fungal richness Global dataset PacBio sequencing Soil fungi |
| Type | Article |
| Pagination | 573-588 |
| Issue Number | 1 |
| Volume Number | 111 |
| ESSN | 1878-9129 |
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