Browsing by Author "EL-Manzalawy, Yasser"

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Assessing the effects of data selection and representation on the development of reliable E. coli sigma 70 promoter region predictors

Abbas, Mostafa M.; Mohie-Eldin, Mostafa M.; El-Manzalawy, Yasser ( Public Library of Science , 2015 , Article)
As the number of sequenced bacterial genomes increases, the need for rapid and reliable tools for the annotation of functional elements (e.g., transcriptional regulatory elements) becomes more desirable. Promoters are the ...
FastRNABindR: Fast and Accurate Prediction of Protein-RNA Interface Residues

EL-Manzalawy, Yasser; Abbas, Mostafa; Malluhi, Qutaibah; Honavar, Vasant ( Public Library of Science (PLoS) , 2016 , Article)
A wide range of biological processes, including regulation of gene expression, protein synthesis, and replication and assembly of many viruses are mediated by RNA-protein interactions. However, experimental determination ...