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Using the Sadakane compressed suffix tree to solve the all-pairs suffix-prefix problem
(
Hindawi
, 2014 , Article)
The all-pairs suffix-prefix matching problem is a basic problem in string processing. It has an application in the de novo genome assembly task, which is one of the major bioinformatics problems. Due to the large size of ...
Assessing the effects of data selection and representation on the development of reliable E. coli sigma 70 promoter region predictors
(
Public Library of Science
, 2015 , Article)
As the number of sequenced bacterial genomes increases, the need for rapid and reliable tools for the annotation of functional elements (e.g., transcriptional regulatory elements) becomes more desirable. Promoters are the ...
A Practical and Scalable Tool to Find Overlaps between Sequences
(
Hindawi
, 2015 , Article)
The evolution of the next generation sequencing technology increases the demand for efficient solutions, in terms of space and time, for several bioinformatics problems. This paper presents a practical and easy-to-implement ...
FastRNABindR: Fast and Accurate Prediction of Protein-RNA Interface Residues
(
Public Library of Science (PLoS)
, 2016 , Article)
A wide range of biological processes, including regulation of gene expression, protein synthesis, and replication and assembly of many viruses are mediated by RNA-protein interactions. However, experimental determination ...
MLP Neural Network Based Gas Classification System on Zynq SoC
(
Institute of Electrical and Electronics Engineers Inc.
, 2016 , Article)
Systems based on wireless gas sensor networks offer a powerful tool to observe and analyze data in complex environments over long monitoring periods. Since the reliability of sensors is very important in those systems, gas ...
Using thermochromic ink for medical simulations
(
Hamad bin Khalifa University Press (HBKU Press)
, 2017 , Article)
Background: In medical simulation and training, blood is used to exhibit its different behaviors in context. In some cases, blood color differential is an imperative visual effect to ensure high-fidelity training and ...
Cybersecurity for next generation healthcare in Qatar
(
Hamad bin Khalifa University Press (HBKU Press)
, 2021 , Article)
Background: IoMT (Internet of Medical Things) devices (often referred to IoMT domain) have the potential to quickly diagnose and monitor patients outside the hospital by transmitting information through the cloud domain ...
Design and implementation of a modular ECMO simulator
(
Hamad bin Khalifa University Press (HBKU Press)
, 2016 , Article)
Background: Extracorporeal membrane oxygenation (ECMO) is a high-complexity life-saving procedure riddled with mechanical complications that can place the patient in a critical state where fast and coordinated actions are ...
Fuzzy Identification-Based Encryption for healthcare user face authentication
(
Hamad bin Khalifa University Press (HBKU Press)
, 2022 , Article)
Background: Internet of Medical Things (IOMT) has the potential to monitor health continuously and in real-time. One of the main issues that arise in IOMT is how securely the data can be transmitted to the clinical team. ...
Secure smart contract-enabled control of battery energy storage systems against cyber-attacks
(
Elsevier B.V.
, 2019 , Article)
Battery Energy Storage Systems (BESSs) are an integral part of a sustainable and resilient smart grid. The security of such critical cyber-physical infrastructure is considered as a major priority for both industry and ...