Browsing Qatar University Institutional Repository by Author "Abbas, Mostafa M."
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Assessing the effects of data selection and representation on the development of reliable E. coli sigma 70 promoter region predictors
Abbas, Mostafa M.; Mohie-Eldin, Mostafa M.; El-Manzalawy, Yasser ( Public Library of Science , 2015 , Article)As the number of sequenced bacterial genomes increases, the need for rapid and reliable tools for the annotation of functional elements (e.g., transcriptional regulatory elements) becomes more desirable. Promoters are the ... -
In-memory distributed matrix computation processing & optimization
Yu, Yongyang; Tang, Mingjie; Aref, Walid G.; Malluhi, Qutaibah M.; Abbas, Mostafa M.; Ouzzani, Mourad... more authors ... less authors ( IEEE Computer Society , 2017 , Conference Paper)The use of large-scale machine learning and data mining methods is becoming ubiquitous in many application domains ranging from business intelligence and bioinformatics to self-driving cars. These methods heavily rely on ... -
Parallelizing exact motif finding algorithms on multi-core
Abbas, Mostafa M.; Bahig, Hazem M.; Abouelhoda, Mohamed; Mohie-Eldin, M.M. ( Springer Science+Business Media , 2014 , Article)The motif finding problem is one of the important and challenging problems in bioinformatics. A variety of sequential algorithms have been proposed to find exact motifs, but the running time is still not suitable due to ...